BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E11LP1|AL429419
(989 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1054 1811 0.0
>3x_Contig1054
Length = 4453
Score = 1811 bits (896), Expect = 0.0
Identities = 953/990 (96%), Gaps = 1/990 (0%)
Strand = Plus / Minus
Query: 1 tatatagtatatgtatttattcttggwgattaattaaattagtgaagaatcatggtttaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3380 tatatagtatatgtatttattcttggagattaattaaattagtgaagaatcatggtttaa 3321
Query: 61 tcatttcgaggggagaatccatcagaacggaaattttaccctgccaaccgatgattcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 tcatttcgaggggagaatccatcagaacggaaattttaccctgccaaccgatgattcaaa 3261
Query: 121 aaaaaaaaaaaaaaaaatttggcaaaaacmcycaagtgcaattttttcccaagaaacggc 180
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 3260 aaaaaaaaaaaaaaaaatttggcaaaaacactcaagtgcaattttttcccaagaaacggc 3201
Query: 181 agtcagaggrgaaacaatacgtcgttagatgcmatacggcyacgtgggtgattgattatt 240
||| ||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||
Sbjct: 3200 agtaagaggagaaacaatacgtcgttagatgcaatacggctacgtgggttattgattatt 3141
Query: 241 aaacgttggttgttgtccatatatagcyataaammagamcgtggtttgcyagcytcttat 300
||||||||||||||||||||||||||| ||||| ||| |||||||||| ||| ||||||
Sbjct: 3140 aaacgttggttgttgtccatatatagctataaaaaagaacgtggtttgctagcttcttat 3081
Query: 301 gagcgtgcgagccagagtggcatgggcagccagcctaacctgatcccgataaaccycagc 360
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3080 gagcgtgcgagcaagagttgcatgggcagccagcctaacctgatcccgataaacctcagc 3021
Query: 361 caccgagcygcycycttctgaagcggctttgcmagggttacggatgakggkggtacgtaa 420
||||||| || | |||||||||||||||||| |||||||||||||| || |||||||||
Sbjct: 3020 taccgagctgctctcttctgaagcggctttgcaagggttacggatgatggtggtacgtaa 2961
Query: 421 ttataaagtgggtacgtctttgctgggtgactggratttcatgtttctgtaagattcycg 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 2960 ttataaagtgggtacgtctttgctgggtgactggaatttcatgtttctgtaagattctcg 2901
Query: 481 ggagggtaacaataatgattatgataacmcccmaggccgtccaacagggtctgggccccc 540
|||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| |
Sbjct: 2900 ggagggtaacaataatgattatgataacacccaaggccgttcaacagggtctgggccctc 2841
Query: 541 cycgaaacaaaacaagttttgggccatgtatcaycattatttacggatgtgtcgtgtgac 600
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2840 ctcgaaacaaaacaagttttgggccatgtatcatcattatttacggatgtgtcgtgtgac 2781
Query: 601 actgagatcttcgctcttatttaccgtaatatacatataccaatgcacatatctgtgtgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2780 actgagatcttcgctcttatttaccgtaatatacatataccaatgcacatatctgtgtgc 2721
Query: 661 tttatatgtataaatatgtaaatataaaatataccatcctaattacctgtatttcattct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2720 tttatatgtataaatatgtaaatataaaatataccatcctaattacctgtatttcattct 2661
Query: 721 gcatcatattgtagtatacgatttgtataaaaaagttcaaaagcttattatcctttaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 gcatcatattgtagtatacgatttgtataaaaaagttcaaaagcttattatcctttaagg 2601
Query: 781 ttaaagataaaaatcaacacttgtggcacttgtgtttcttctcgtgtcttcgtaaattgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 ttaaagataaaaatcaacacttgtggcacttgtgtttcttctcgtgtcttcgtaaattgc 2541
Query: 841 tcttgacattgtagcycttgttacaatcaagatatgtacatttgaacggtttcgcctgtk 900
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2540 tcttgacattgtagctcttgttacaatcaagatatgtacatttgaacggtttcgcctgtg 2481
Query: 901 aatgcaccmctatatgtgttttcaaagtgcttggacgagag-attctttcccgcmaatgt 959
|||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 2480 aatgcaccactatatgtgttttcaaagtgcttggacgagagaattctttcccgcaaatgt 2421
Query: 960 ggcatttcttacagtgtattttcttcttgt 989
||||||||||||||||||||||||||||||
Sbjct: 2420 ggcatttcttacagtgtattttcttcttgt 2391
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,532
Number of Sequences: 1807
Number of extensions: 20532
Number of successful extensions: 5526
Number of sequences better than 1.0e-20: 1
length of query: 989
length of database: 10,358,551
effective HSP length: 16
effective length of query: 973
effective length of database: 10,329,639
effective search space: 10050738747
effective search space used: 10050738747
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 50 (101.6 bits)